tag:blogger.com,1999:blog-8499895524521663926.post2664265458655077852..comments2024-03-27T07:13:39.236-04:00Comments on Phylogenetic Tools for Comparative Biology: New version of phytools package available, now with documentation files!!Liam Revellhttp://www.blogger.com/profile/04314686830842384151noreply@blogger.comBlogger6125tag:blogger.com,1999:blog-8499895524521663926.post-46495729454935346542011-06-16T16:18:18.486-04:002011-06-16T16:18:18.486-04:00Thanks for giving the package a try, guys. Hope t...Thanks for giving the package a try, guys. Hope to see some of you at 'Evolution' in a couple of days.Liam Revellhttps://www.blogger.com/profile/04314686830842384151noreply@blogger.comtag:blogger.com,1999:blog-8499895524521663926.post-39443535860741352122011-06-16T13:54:03.231-04:002011-06-16T13:54:03.231-04:00The install works for me!The install works for me!Anonymoushttps://www.blogger.com/profile/01944150859555101169noreply@blogger.comtag:blogger.com,1999:blog-8499895524521663926.post-26611051208450291312011-06-16T13:13:28.507-04:002011-06-16T13:13:28.507-04:00@Dave - also you can always get the package descri...@Dave - also you can always get the package description and a list of functions using:<br /><br />> library(help=phytools)Liam Revellhttps://www.blogger.com/profile/04314686830842384151noreply@blogger.comtag:blogger.com,1999:blog-8499895524521663926.post-90690810488428822011-06-16T06:12:30.720-04:002011-06-16T06:12:30.720-04:00Dave - Great suggestions.
Raptor's Nest - Oop...Dave - Great suggestions.<br /><br />Raptor's Nest - Oops, so it does! Thanks for catching that.<br /><br />- LiamLiam Revellhttps://www.blogger.com/profile/04314686830842384151noreply@blogger.comtag:blogger.com,1999:blog-8499895524521663926.post-21699462864377867152011-06-16T06:00:41.053-04:002011-06-16T06:00:41.053-04:00Hi,
This is great! Thanks very much!
I noticed t...Hi,<br /><br />This is great! Thanks very much!<br /><br />I noticed the documentation for phylosig() when called using help(phylosig) has the 'Description' for phyl.resid().Raptor's Nesthttps://www.blogger.com/profile/01451618880276065935noreply@blogger.comtag:blogger.com,1999:blog-8499895524521663926.post-18757815674948460892011-06-15T23:02:31.636-04:002011-06-15T23:02:31.636-04:00Works well for me from the package binaries!
By t...Works well for me from the package binaries!<br /><br />By the way, do you think you could add a 'phytools' man page? I find these summary pages helpful, if for nothing but when I can't remember anything about the function name, I can at least bring up the package's index from its summary page.<br /><br />Also, as a suggestion, you might want to specify in the man what the null hypotheses are in the significance tests for phylosig(). Took me a little while to figure whether they were trying to reject the hypothesis that there was no-signal or that there was signal.<br /><br />Anyway, looking great!<br />-Davedwbapsthttps://www.blogger.com/profile/17606476387441191531noreply@blogger.com