tag:blogger.com,1999:blog-8499895524521663926.post3708375916981241716..comments2024-03-27T07:13:39.236-04:00Comments on Phylogenetic Tools for Comparative Biology: Significant updates to threshBayes for the correlational threshold modelLiam Revellhttp://www.blogger.com/profile/04314686830842384151noreply@blogger.comBlogger3125tag:blogger.com,1999:blog-8499895524521663926.post-49113861798436666252020-08-03T01:52:53.131-04:002020-08-03T01:52:53.131-04:00Hi Liam,
Thank you for your reply, I was thinking...Hi Liam, <br />Thank you for your reply, I was thinking about doing that as well.<br /><br />Best,<br />Sandra.Sandrahttps://www.blogger.com/profile/06283758828817954369noreply@blogger.comtag:blogger.com,1999:blog-8499895524521663926.post-37143857667739515622020-07-27T19:00:32.676-04:002020-07-27T19:00:32.676-04:00Hi Sandra. Unfortunately not. Something that I'...Hi Sandra. Unfortunately not. Something that I've seen done is that people use phytools::ancThresh to generate a posterior distribution of liabilities for the tips of a tree for their multi-state character, and then use this distribution (or its mean or median) in other analyses. This seems pretty reasonable, but I don't know if it is theoretically well-justified. - LiamLiam Revellhttps://www.blogger.com/profile/04314686830842384151noreply@blogger.comtag:blogger.com,1999:blog-8499895524521663926.post-89074978363652264352020-07-27T17:01:52.948-04:002020-07-27T17:01:52.948-04:00Dear Liam,
It seems that threshBayes is only abl...Dear Liam, <br /><br />It seems that threshBayes is only able to deal with binary or continuous traits at the moment. I am wondering whether it would be possible to test in a similar way the correlation between two multi-state discrete traits? <br /><br />Best,<br />Sandra.Sandrahttps://www.blogger.com/profile/06283758828817954369noreply@blogger.com