I just posted a version of my function for ancestral character estimation under the threshold model (e.g.,
1,
2,
3). Direct link to the code is
here. I'm sharing this because there has been some interest since I started posting about the method, but I should note that this is a brand new function & method, and the code is "bleeding edge," so should be used only with caution. (I'm also working on a manuscript describing the approach.)
Thanks for this!
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